Treatment Pathway Alluvial Plot

Usage

alluvialSurvival(
  data,
  timeVar,
  stageVar,
  treatmentVar,
  patientId,
  survivalVar,
  showRightAxis = FALSE,
  colorScheme = "clinical",
  showSurvival = FALSE
)

Arguments

data: .
timeVar: The name of the time variable in the dataset
stageVar: The name of the disease stage variable
treatmentVar: Treatment received at each time point
patientId: Unique patient identifier for tracking
survivalVar: Survival status at each time point
showRightAxis: .
colorScheme: .
showSurvival: .

Value

A results object containing:

`results$todo`					a html
`results$mydataview`					a preformatted
`results$plot`					an image
`results$summaryTable`					a table
`results$survivalStats`					a table

Tables can be converted to data frames with asDF or as.data.frame. For example:

results$summaryTable$asDF

as.data.frame(results$summaryTable)